1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
|
\name{checkexperiment}
\alias{checkexperiment}
\alias{checkplate}
\title{Check raw data from a specified experiment or microtiter plate}
\description{
Report metadata from a specified experiment or microtiter plate from a
specified database, box plot controls, and plot the dose-response data.
}
\usage{
checkplate(id, db = c("cytotox", "enzymes"))
checkexperiment(id, db = c("ecotox", "cytotox", "enzymes"), endpoint = "\%",
whereClause = "1")
}
\arguments{
\item{id}{
The id of the experiment or the plate identifying it within the database.}
\item{db}{
The database to be used. Currently, the microtiter plate databases
"cytotox", "enzymes" of the UFT Department of Bioorganic Chemistry are
supported, as well as the database of ecotoxicity experiments "ecotox".}
\item{endpoint}{
The endpoint that should be used for selecting the data. Only important if
the database "ecotox" is used. Defaults to "\%".}
\item{whereClause}{
With this argument, additional conditions for the SQL query can be set,
e.g. "duration = 48" (i.e. "Only retrieve data with duration 48"). The
default is 1 (in SQL syntax this means TRUE).}
}
\value{
The function lists a report and shows two graphs.
}
\examples{
# Check plate number 3 in the cytotox database
\dontrun{checkplate(3)}
# Check data from experiment 1517 with duration 48 hours
\dontrun{checkexperiment(1517, whereClause = "duration = 48")}
}
\author{
Johannes Ranke
\email{jranke@uni-bremen.de}
}
\keyword{database}
|
