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author | Johannes Ranke <jranke@uni-bremen.de> | 2015-06-19 17:46:11 +0200 |
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committer | Johannes Ranke <jranke@uni-bremen.de> | 2015-06-19 17:46:11 +0200 |
commit | ec574cff822a1238138c0aa69b3d1459bdc3dfa8 (patch) | |
tree | ed35e64ca0a2e51b0974e7fa3efd768aa5bc446a /NEWS.md | |
parent | 6281424beafe531c9891670c3227ab12e9a21990 (diff) |
Use odeintr instead of ccSolve for compiling modelsodeintr
Diffstat (limited to 'NEWS.md')
-rw-r--r-- | NEWS.md | 6 |
1 files changed, 3 insertions, 3 deletions
@@ -2,13 +2,13 @@ ## MAJOR CHANGES -- If the ccSolve package is installed, use a version of the differential equation model compiled from C code, which is a huge performance boost for models where only the deSolve method works. Compiled models using the Hockey Stick model (HS) are not supported (yet). -- `mkinmod()`: Create a list component $compiled in the list returned by mkinmod, if a version can be compiled from autogenerated C code (see above). -- `mkinfit()`: Set the default `solution_type` to `deSolve` when a compiled version of the model is present, except if an analytical solution is possible. +- `mkinmod()`: If the C++ compiler g++ is installed and eigenvalue based solution is not possible, produce a version of the differential equation model compiled from C code, which is a huge performance boost for models where only the deSolve method works. The integration method and its tolerances are set in the call to `mkinmod()` in this case. The compiled model is stored in an environment component $e in the list returned by mkinmod. +- `mkinfit()`: Set the default `solution_type` to `odeintr` when a compiled version of the model is present, except if an analytical solution is possible. ## MINOR CHANGES - Added a simple showcase vignette with an evaluation of FOCUS example dataset D +- Change the naming of the IORE rate constante from k.iore to k__iore to make int compatible with C++ # CHANGES in mkin VERSION 0.9-35 |