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| author | Johannes Ranke <jranke@uni-bremen.de> | 2019-10-21 18:52:24 +0200 |
|---|---|---|
| committer | Johannes Ranke <jranke@uni-bremen.de> | 2019-10-21 18:54:37 +0200 |
| commit | e09f726134ee273b6b191c1ec6465e6f701b082b (patch) | |
| tree | aabc6bec231fb9dd085deef57a030e41ec398bf4 /docs/reference/synthetic_data_for_UBA_2014.html | |
| parent | bea054418c5310103252f5d243b2d18fcbf7b11f (diff) | |
Improve some plotting routines, more tests
Static documentation rebuilt by pkgdown
Diffstat (limited to 'docs/reference/synthetic_data_for_UBA_2014.html')
| -rw-r--r-- | docs/reference/synthetic_data_for_UBA_2014.html | 32 |
1 files changed, 16 insertions, 16 deletions
diff --git a/docs/reference/synthetic_data_for_UBA_2014.html b/docs/reference/synthetic_data_for_UBA_2014.html index a639151b..ddc88c21 100644 --- a/docs/reference/synthetic_data_for_UBA_2014.html +++ b/docs/reference/synthetic_data_for_UBA_2014.html @@ -278,12 +278,13 @@ Compare also the code in the example section to see the degradation models." /> <span class='co'># This is just one example of an evaluation using the kinetic model used for</span> <span class='co'># the generation of the data</span> -<span class='no'>fit</span> <span class='kw'><-</span> <span class='fu'><a href='mkinfit.html'>mkinfit</a></span>(<span class='no'>m_synth_SFO_lin</span>, <span class='no'>synthetic_data_for_UBA_2014</span><span class='kw'>[[</span><span class='fl'>1</span>]]$<span class='no'>data</span>, - <span class='kw'>quiet</span> <span class='kw'>=</span> <span class='fl'>TRUE</span>) -<span class='fu'><a href='plot.mkinfit.html'>plot_sep</a></span>(<span class='no'>fit</span>)</div><div class='img'><img src='synthetic_data_for_UBA_2014-1.png' alt='' width='700' height='433' /></div><div class='input'><span class='fu'><a href='https://rdrr.io/r/base/summary.html'>summary</a></span>(<span class='no'>fit</span>)</div><div class='output co'>#> mkin version used for fitting: 0.9.49.6 +<span class='co'># \dontrun{</span> + <span class='no'>fit</span> <span class='kw'><-</span> <span class='fu'><a href='mkinfit.html'>mkinfit</a></span>(<span class='no'>m_synth_SFO_lin</span>, <span class='no'>synthetic_data_for_UBA_2014</span><span class='kw'>[[</span><span class='fl'>1</span>]]$<span class='no'>data</span>, + <span class='kw'>quiet</span> <span class='kw'>=</span> <span class='fl'>TRUE</span>) + <span class='fu'><a href='plot.mkinfit.html'>plot_sep</a></span>(<span class='no'>fit</span>)</div><div class='img'><img src='synthetic_data_for_UBA_2014-1.png' alt='' width='700' height='433' /></div><div class='input'> <span class='fu'><a href='https://rdrr.io/r/base/summary.html'>summary</a></span>(<span class='no'>fit</span>)</div><div class='output co'>#> mkin version used for fitting: 0.9.49.6 #> R version used for fitting: 3.6.1 -#> Date of fit: Thu Sep 19 12:48:50 2019 -#> Date of summary: Thu Sep 19 12:48:50 2019 +#> Date of fit: Mon Oct 21 18:52:20 2019 +#> Date of summary: Mon Oct 21 18:52:20 2019 #> #> Equations: #> d_parent/dt = - k_parent * parent @@ -292,21 +293,20 @@ Compare also the code in the example section to see the degradation models." /> #> #> Model predictions using solution type deSolve #> -#> Fitted using 847 model solutions performed in 2.49 s +#> Fitted using 847 model solutions performed in 2.42 s #> #> Error model: Constant variance #> #> Error model algorithm: OLS #> #> Starting values for parameters to be optimised: -#> value type -#> parent_0 101.350000 state -#> k_parent 0.100000 deparm -#> k_M1 0.100100 deparm -#> k_M2 0.100200 deparm -#> f_parent_to_M1 0.500000 deparm -#> f_M1_to_M2 0.500000 deparm -#> sigma 2.273126 error +#> value type +#> parent_0 101.3500 state +#> k_parent 0.1000 deparm +#> k_M1 0.1001 deparm +#> k_M2 0.1002 deparm +#> f_parent_to_M1 0.5000 deparm +#> f_M1_to_M2 0.5000 deparm #> #> Starting values for the transformed parameters actually optimised: #> value lower upper @@ -316,7 +316,6 @@ Compare also the code in the example section to see the degradation models." /> #> log_k_M2 -2.300587 -Inf Inf #> f_parent_ilr_1 0.000000 -Inf Inf #> f_M1_ilr_1 0.000000 -Inf Inf -#> sigma 2.273126 0 Inf #> #> Fixed parameter values: #> value type @@ -424,7 +423,8 @@ Compare also the code in the example section to see the degradation models." /> #> 90 M2 10.6 1.013e+01 0.47130 #> 90 M2 10.8 1.013e+01 0.67130 #> 120 M2 9.8 5.521e+00 4.27893 -#> 120 M2 3.3 5.521e+00 -2.22107</div></pre> +#> 120 M2 3.3 5.521e+00 -2.22107</div><div class='input'># } +</div></pre> </div> <div class="col-md-3 hidden-xs hidden-sm" id="sidebar"> <h2>Contents</h2> |