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authorJohannes Ranke <jranke@uni-bremen.de>2021-02-03 16:41:31 +0100
committerJohannes Ranke <jranke@uni-bremen.de>2021-02-03 18:18:19 +0100
commitf0ef23a7598e5d19648ae4edc2b74e0fba27a41c (patch)
tree03af20e730330e148acf3a7c008d82387dbe52eb /man/plot.mixed.mmkin.Rd
parent82814b17ec182467c25325d747fffa8ffbe4bb33 (diff)
Prepare for v1.0.0v1.0.0
- Improve authorship and copyright information - Prepare pkgdown config - Remove dependence on saemix as we need the development version which is not ready for CRAN - Temporarily remove saemix interface to check code coverage of the rest
Diffstat (limited to 'man/plot.mixed.mmkin.Rd')
-rw-r--r--man/plot.mixed.mmkin.Rd13
1 files changed, 2 insertions, 11 deletions
diff --git a/man/plot.mixed.mmkin.Rd b/man/plot.mixed.mmkin.Rd
index c7b2344f..87a82286 100644
--- a/man/plot.mixed.mmkin.Rd
+++ b/man/plot.mixed.mmkin.Rd
@@ -17,7 +17,7 @@
maxabs = "auto",
ncol.legend = ifelse(length(i) <= 3, length(i) + 1, ifelse(length(i) <= 8, 3, 4)),
nrow.legend = ceiling((length(i) + 1)/ncol.legend),
- rel.height.legend = 0.03 + 0.08 * nrow.legend,
+ rel.height.legend = 0.02 + 0.07 * nrow.legend,
rel.height.bottom = 1.1,
pch_ds = 1:length(i),
col_ds = pch_ds + 1,
@@ -27,7 +27,7 @@
)
}
\arguments{
-\item{x}{An object of class \link{mixed.mmkin}, \link{saem.mmkin} or \link{nlme.mmkin}}
+\item{x}{An object of class \link{mixed.mmkin}, \link{nlme.mmkin}}
\item{i}{A numeric index to select datasets for which to plot the individual predictions,
in case plots get too large}
@@ -94,15 +94,6 @@ plot(f[, 3:4], standardized = TRUE)
f_nlme <- nlme(f, control = list(pnlsMaxIter = 120, tolerance = 1e-3))
plot(f_nlme)
-f_saem <- saem(f, transformations = "saemix")
-plot(f_saem)
-
-# We can overlay the two variants if we generate predictions
-pred_nlme <- mkinpredict(dfop_sfo,
- f_nlme$bparms.optim[-1],
- c(parent = f_nlme$bparms.optim[[1]], A1 = 0),
- seq(0, 180, by = 0.2))
-plot(f_saem, pred_over = list(nlme = pred_nlme))
}
}
\author{

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