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authorJohannes Ranke <jranke@uni-bremen.de>2022-10-31 17:01:58 +0100
committerJohannes Ranke <jranke@uni-bremen.de>2022-10-31 17:01:58 +0100
commit300aa6ec27529f46deda07874566dc8fcee4e6e7 (patch)
tree5a78a7bad10e569d439060ee09547e27f9a45c7b /man
parente444e3eb3e21c66c34ce48775467cd9fa53f2a92 (diff)
Fix R CMD check
Diffstat (limited to 'man')
-rw-r--r--man/anova.saem.mmkin.Rd6
-rw-r--r--man/mhmkin.Rd7
-rw-r--r--man/saem.Rd4
3 files changed, 14 insertions, 3 deletions
diff --git a/man/anova.saem.mmkin.Rd b/man/anova.saem.mmkin.Rd
index ab6022bc..34711c41 100644
--- a/man/anova.saem.mmkin.Rd
+++ b/man/anova.saem.mmkin.Rd
@@ -31,6 +31,8 @@ only be done for nested models.}
an "anova" data frame; the traditional (S3) result of anova()
}
\description{
-Generate an anova object. The method to calculate the BIC is that from
-the saemix package. As in other prominent anova methods, models are sorted
+Generate an anova object. The method to calculate the BIC is that from the
+saemix package. As in other prominent anova methods, models are sorted by
+number of parameters, and the tests (if requested) are always relative to
+the model on the previous line.
}
diff --git a/man/mhmkin.Rd b/man/mhmkin.Rd
index 0ef1599e..1a6e3869 100644
--- a/man/mhmkin.Rd
+++ b/man/mhmkin.Rd
@@ -2,6 +2,7 @@
% Please edit documentation in R/mhmkin.R
\name{mhmkin}
\alias{mhmkin}
+\alias{mhmkin.mmkin}
\alias{mhmkin.list}
\alias{[.mhmkin}
\alias{print.mhmkin}
@@ -10,6 +11,8 @@ degradation models and one or more error models}
\usage{
mhmkin(objects, backend = "saemix", algorithm = "saem", ...)
+\method{mhmkin}{mmkin}(objects, ...)
+
\method{mhmkin}{list}(
objects,
backend = "saemix",
@@ -24,7 +27,9 @@ mhmkin(objects, backend = "saemix", algorithm = "saem", ...)
}
\arguments{
\item{objects}{A list of \link{mmkin} objects containing fits of the same
-degradation models to the same data, but using different error models.}
+degradation models to the same data, but using different error models.
+Alternatively, a single \link{mmkin} object containing fits of several
+degradation models to the same data}
\item{backend}{The backend to be used for fitting. Currently, only saemix is
supported}
diff --git a/man/saem.Rd b/man/saem.Rd
index d7b04691..9167b51f 100644
--- a/man/saem.Rd
+++ b/man/saem.Rd
@@ -14,6 +14,7 @@ saem(object, ...)
\method{saem}{mmkin}(
object,
transformations = c("mkin", "saemix"),
+ error_model = "auto",
degparms_start = numeric(),
test_log_parms = TRUE,
conf.level = 0.6,
@@ -37,6 +38,7 @@ saemix_model(
object,
solution_type = "auto",
transformations = c("mkin", "saemix"),
+ error_model = "auto",
degparms_start = numeric(),
covariance.model = "auto",
no_random_effect = NULL,
@@ -64,6 +66,8 @@ are done in 'saemix' for the supported cases, i.e. (as of version 1.1.2)
SFO, FOMC, DFOP and HS without fixing \code{parent_0}, and SFO or DFOP with
one SFO metabolite.}
+\item{error_model}{Possibility to override the error model used in the mmkin object}
+
\item{degparms_start}{Parameter values given as a named numeric vector will
be used to override the starting values obtained from the 'mmkin' object.}

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