aboutsummaryrefslogtreecommitdiff
path: root/test.log
diff options
context:
space:
mode:
authorJohannes Ranke <jranke@uni-bremen.de>2021-03-31 19:42:17 +0200
committerJohannes Ranke <jranke@uni-bremen.de>2021-03-31 19:42:17 +0200
commit3a5463672c297b37c3c9135c8b144c48744c05d0 (patch)
treef28691df6359757133510ae44399ce71ecbfaa93 /test.log
parent7bca4f58951c1c8cae63c4557102ae77a3aff616 (diff)
Bug fix in plot.mkinfit
In residual plots, use xlab and xlim if appropriate
Diffstat (limited to 'test.log')
-rw-r--r--test.log33
1 files changed, 25 insertions, 8 deletions
diff --git a/test.log b/test.log
index 80b64269..b49088e5 100644
--- a/test.log
+++ b/test.log
@@ -3,14 +3,14 @@ Loading required package: parallel
Testing mkin
✔ | OK F W S | Context
✔ | 5 | AIC calculation
-✔ | 2 | Export dataset for reading into CAKE [0.2 s]
+✔ | 2 | Export dataset for reading into CAKE
✔ | 14 | Results for FOCUS D established in expertise for UBA (Ranke 2014) [1.0 s]
✔ | 4 | Calculation of FOCUS chi2 error levels [0.5 s]
-✔ | 7 | Fitting the SFORB model [3.4 s]
+✔ | 7 | Fitting the SFORB model [3.5 s]
✔ | 5 | Analytical solutions for coupled models [3.1 s]
✔ | 5 | Calculation of Akaike weights
-✔ | 12 | Confidence intervals and p-values [1.1 s]
-✔ | 14 | Error model fitting [4.1 s]
+✔ | 12 | Confidence intervals and p-values [1.0 s]
+✔ | 14 | Error model fitting [4.2 s]
✔ | 5 | Time step normalisation
✔ | 4 | Test fitting the decline of metabolites from their maximum [0.3 s]
✔ | 1 | Fitting the logistic model [0.2 s]
@@ -19,10 +19,27 @@ Testing mkin
✔ | 1 | mkinfit features [0.3 s]
✔ | 10 | Special cases of mkinfit calls [0.3 s]
✔ | 8 | mkinmod model generation and printing [0.2 s]
-✔ | 3 | Model predictions with mkinpredict [0.3 s]
+✔ | 3 | Model predictions with mkinpredict [0.4 s]
✔ | 16 | Evaluations according to 2015 NAFTA guidance [1.6 s]
✔ | 9 | Nonlinear mixed-effects models [7.9 s]
-✔ | 14 | Plotting [1.7 s]
+✖ | 10 4 | Plotting [1.7 s]
+────────────────────────────────────────────────────────────────────────────────
+Failure (test_plot.R:20:3): Plotting mkinfit, mmkin and mixed model objects is reproducible
+Figures don't match: mkinfit-plot-for-focus-c-with-residuals-like-in-gmkin.svg
+
+
+Failure (test_plot.R:21:3): Plotting mkinfit, mmkin and mixed model objects is reproducible
+Figures don't match: plot-res-for-focus-c.svg
+
+
+Failure (test_plot.R:22:3): Plotting mkinfit, mmkin and mixed model objects is reproducible
+Figures don't match: mkinfit-plot-for-focus-c-with-sep-true.svg
+
+
+Failure (test_plot.R:30:3): Plotting mkinfit, mmkin and mixed model objects is reproducible
+Figures don't match: plot-res-for-focus-d.svg
+
+────────────────────────────────────────────────────────────────────────────────
✔ | 4 | Residuals extracted from mkinfit models
✔ | 2 | Complex test case from Schaefer et al. (2007) Piacenza paper [1.5 s]
✔ | 4 | Summary [0.1 s]
@@ -32,6 +49,6 @@ Testing mkin
✔ | 4 | Calculation of maximum time weighted average concentrations (TWAs) [2.5 s]
══ Results ═════════════════════════════════════════════════════════════════════
-Duration: 40.9 s
+Duration: 41.0 s
-[ FAIL 0 | WARN 0 | SKIP 0 | PASS 174 ]
+[ FAIL 4 | WARN 0 | SKIP 0 | PASS 170 ]

Contact - Imprint