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2023-05-19Prepare release of v1.2.4v1.2.4Johannes Ranke1-1/+1
- Update DESCRIPTION - Update Makefile to document how to use R-patched - Remove markup from two URLs to avoid CRAN NOTE - Switch two vignettes from html_document to html_vignette to save space in the docs directory, also avoiding a CRAN NOTE - Complete rebuild of pkgdown docs for release
2023-04-20Fix and rebuild documentation, see NEWSJohannes Ranke1-9/+26
I had to fix the two pathway vignettes, as they did not work with the released version any more. So they and the multistart vignette which got some small fixes as well were rebuilt. Complete rebuild of the online docs with the released version. The documentation of the 'hierarchial_kinetics' format had to be fixed as well.
2022-11-17Complete update of online docs for v1.2.0Johannes Ranke1-6/+12
2022-03-07Remove nlmixr interface for release of mkin 1.1.0Johannes Ranke1-1/+1
I am postponing my attempts to get the nlmixr interface to CRAN, given some problems with nlmixr using R-devel under Windows, see https://github.com/nlmixrdevelopment/nlmixr/issues/596 and https://github.com/r-hub/rhub/issues/512, which is fixed by the removal of nlmixr from the testsuite. For the tests to be more platform independent, the biphasic mixed effects models test dataset was defined in a way that fitting should be more robust (less ill-defined).
2022-03-02Make tests more platform independent, update docsJohannes Ranke1-108/+59
2021-02-15Improve README, introductory vignette and some other docsv1.0.3Johannes Ranke1-1/+1
Also bump version to 1.0.3.
2021-02-03Prepare for v1.0.0v1.0.0Johannes Ranke1-7/+11
- Improve authorship and copyright information - Prepare pkgdown config - Remove dependence on saemix as we need the development version which is not ready for CRAN - Temporarily remove saemix interface to check code coverage of the rest
2020-05-12Update vignettes and docsJohannes Ranke1-22/+26
2019-11-01Fix bug in yesterdays release, add methods for BICJohannes Ranke1-10/+6
2019-09-18Correct and rebuild docsJohannes Ranke1-6/+16
- Reconcile docs and code for max_twa_parent - Correct links to docs in twa vignette - Static documentation rebuilt by pkgdown
2019-07-05Static documentation rebuilt by pkgdownJohannes Ranke1-1/+1
2019-06-04Additional algorithm "d_c", more tests, docsJohannes Ranke1-2/+2
The new algorithm tries direct optimization of the likelihood, as well as a three step procedure. In this way, we consistently get the model with the highest likelihood for SFO, DFOP and HS for all 12 new test datasets.
2019-04-10Adapt tests, vignettes and examplesJohannes Ranke1-1/+1
- Write the NEWS - Static documentation rebuilt by pkgdown - Adapt mkinerrmin - Fix (hopefully all) remaining problems in mkinfit
2019-02-26Static documentation rebuilt by pkgdownJohannes Ranke1-0/+3
2019-02-25Static documentation rebuilt by current pkgdownJohannes Ranke1-1/+1
2019-02-21Static documentation rebuilt by pkgdownJohannes Ranke1-1/+1
2019-01-31Static documentation rebuilt by pkgdownJohannes Ranke1-12/+13
2018-09-18Support maximum twa for HS, test, docsJohannes Ranke1-1/+1
2018-09-14Remove two vignettes from the package but not from docsJohannes Ranke1-3/+3
- Rebuild static documentation - Adapt test to new approach to two component error model where the model is inadequate
2018-09-14Exclude more example code from CRAN checksJohannes Ranke1-1/+1
to avoid NOTES about long execution times. Static documentation rebuilt by pkgdown with run_dont_run = TRUE
2018-09-14Static documentation rebuilt by pkgdownJohannes Ranke1-1/+1
Also update test log
2018-07-18Correct references to the Rocke and Lorenzato modelJohannes Ranke1-1/+1
Rename 'sigma_rl' to 'sigma_twocomp' as the Rocke and Lorenzato model assumes lognormal distribution for large y. Rebuild static documentation.
2018-06-06Static documentation rebuilt by pkgdown 1.1.0Johannes Ranke1-5/+22
2018-03-11Static docs rebuilt again, with current pkgdownJohannes Ranke1-0/+9
2018-03-11Adapt usage section in help for old dataset to lazy loadingJohannes Ranke1-1/+1
Rebuild pkgdown reference
2018-03-09Another rebuild of the static docsJohannes Ranke1-8/+0
Now with rbenchmark installed, to get results for the compiled_models vignette
2018-03-01Static documentation rebuilt using current pkgdown::build_site()Johannes Ranke1-8/+17
2017-07-29Bump version, update NEWS and rebuild pkdown docsv0.9.46Johannes Ranke1-1/+1
2017-05-05Static docs except articles rebuilt with current pkgdownJohannes Ranke1-17/+19
2017-03-15Static documentation except articles rebuilt by pkgdownJohannes Ranke1-2/+7
2016-11-18Fix links in README, configure navbar, rebuild docsJohannes Ranke1-1/+1
2016-11-18Static documentation rebuilt by pkgdown::build_site(run_dont_run = TRUE)Johannes Ranke1-6/+21
Again with the jranke branch of jranke/pkgdown
2016-11-04Rebuild docs with updated PR for pkgdownJohannes Ranke1-5/+8
2016-11-04Static documentation rebuilt by pkgdown::build_site()Johannes Ranke1-6/+1
With updated pkgdown with my PR
2016-11-03Static documentation rebuilt by pkgdown::build_site()Johannes Ranke1-6/+8
Using pkgdown with PR hadley/pkgdown#212
2016-10-26Complete pkgdown conf, rerun with current master branchJohannes Ranke1-8/+6
2016-10-26Static documentation rebuilt by pkgdown::build_site()Johannes Ranke1-23/+42
2016-10-06Static documentation rebuilt by pkgdown::build_site()Johannes Ranke1-0/+128

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