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2021-02-04Documentation improvements, mainly fixing example codeJohannes Ranke1-7/+11
The errors in the example code were in the \dontrun sections, so they were not caught by CRAN checks. In addition, the static help files generated with pkgdown were cached, so I noticed the errors only after completely regenerating the documentation for version 1.0.0.
2020-11-06Fast analytical solutions for saemix, update.mmkinJohannes Ranke1-8/+11
Also, use logit transformation for g and for solitary formation fractions, addressing #10.
2020-05-15Improve docsJohannes Ranke1-7/+1
2020-05-12Improve documentation, now using a spell checkerJohannes Ranke1-1/+1
2020-05-12Documentation improvements, rebuild static docsJohannes Ranke1-1/+1
2020-03-30First nlme fits for models with a metaboliteJohannes Ranke1-4/+12
2019-10-25Use roxygen for functions and methodsJohannes Ranke1-53/+57
2019-03-04Make some example output more reproducibleJohannes Ranke1-4/+14
In order to avoid some unnecessary documentation rebuilds
2016-11-18Improve examples for showing with pkgdownJohannes Ranke1-3/+3
- Use quiet= TRUE in dontrun sections - Use mkinsub in model definitions - Avoid \code{\link{}} in titles
2016-11-17Remove trailing whitespace, clean headersJohannes Ranke1-10/+10
Also ignore test.R in the top level directory, as it is not meant to be public
2015-06-29Quiet fitting in examples and more links for static docs.Johannes Ranke1-1/+1
2015-06-20Reorganize transform_odeparms example, reduce check timeJohannes Ranke1-1/+5
2015-05-18Make checking faster, testing is done by testsJohannes Ranke1-0/+2
2014-07-21Bugfix, model shorthand, state.ini[[1]] from observed dataJohannes Ranke1-1/+1
- The bug occurred when using transform_rates=FALSE for FOMC, DFOP or HS - Make it possible to use mkinfit("SFO", ...) - Take initial mean value at time zero for the variable with the highest value in the observed data - Update of vignette/FOCUS_L - Improve the Makefile to build single vignettes
2014-07-02Support formation fractions without sink pathway, updatesJohannes Ranke1-9/+41
2014-04-28Adapt the documentation for the HS modelJohannes Ranke1-1/+2
2014-04-22Possibility to fit without parameter transformationJohannes Ranke1-9/+26
2013-10-19Fix the example of transform_odeparms help that was broken by making the columnjranke1-1/+1
names of the data frames "start" and "transformed" in the mkinfit objects consistent. git-svn-id: svn+ssh://svn.r-forge.r-project.org/svnroot/kinfit/pkg/mkin@119 edb9625f-4e0d-4859-8d74-9fd3b1da38cb
2012-04-10- Fitting and summaries now work with the new parameter transformations.jranke1-0/+51
- The SFORB models with metabolites is broken (see TODO) - Moved the vignette to the location recommended since R 2.14 - Added the missing documentation - Commented out the schaefer_complex_case test, as this version of mkin is not able to fit a model without sink and therefore mkin estimated parameters are quite different git-svn-id: svn+ssh://svn.r-forge.r-project.org/svnroot/kinfit/pkg/mkin@22 edb9625f-4e0d-4859-8d74-9fd3b1da38cb

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