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2023-08-04Mesotrione data and vignetteJohannes Ranke1-10/+10
The vignette illustrates pH dependent degradation (covariate modelling) with some detail for the parent compound. Also, a bug in the saem method of the illparms function was fixed, which prevented to find ill-defined parameters in cases where e.g. slopes of covariate models have a negative estimate.
2023-04-01Update tests on 5950xJohannes Ranke1-1/+1
Update platform dependent test plots
2023-03-22Fix typo in mkinerrminJohannes Ranke1-1/+1
Thanks to Sebastian Meyer for spotting it.
2022-11-18Move two saem fits from setup script to skipped testsJohannes Ranke1-2502/+0
Save winbuilder/CRAN check time...
2022-11-14Automatic starting parameters for saem.mmkinJohannes Ranke1-1166/+1166
For the case of mkin transformations. This gives faster convergence, and appears to avoid problems with numeric ODE solutions
2022-10-25Change DFOP mixed model data in tests, updatesJohannes Ranke1-1202/+1202
2022-07-21Summary method for mmkin objectsJohannes Ranke4-5038/+1169
Also, add a method for gathering convergence information and a method for gathering information on ill-defined parameters
2022-07-12Tests before releasev1.1.1Johannes Ranke2-0/+3869
2022-07-08Store DLL info in mkinmod objects for performanceJohannes Ranke2-1169/+1169
Thanks to Tomas Kalibera for his analysis of the problem on the r-package-devel mailing list and for the suggestion on how to fix it. See the current benchmark vignette for the new data on mkin 1.1.1 with R 4.2.1, with unprecedented performance.
2022-04-13More control of y axes in plot.mkinfit, updatesJohannes Ranke4-7/+7
Documentation and test results were updated, the latter with regard to the previous work on plot.mixed.mmkin.
2022-03-07Remove nlmixr interface for release of mkin 1.1.0Johannes Ranke1-2193/+2199
I am postponing my attempts to get the nlmixr interface to CRAN, given some problems with nlmixr using R-devel under Windows, see https://github.com/nlmixrdevelopment/nlmixr/issues/596 and https://github.com/r-hub/rhub/issues/512, which is fixed by the removal of nlmixr from the testsuite. For the tests to be more platform independent, the biphasic mixed effects models test dataset was defined in a way that fitting should be more robust (less ill-defined).
2022-03-02Make tests more platform independent, update docsJohannes Ranke1-1155/+1163
2022-02-09Adapt saemix interface to saemix 3.0 on CRANJohannes Ranke2-1445/+1445
2021-11-17Update required saemix version, update testsJohannes Ranke2-1439/+1439
2021-07-23Merge branch 'master' into nlmixrJohannes Ranke16-0/+7577
After the merge, run make test and accept the new snapshot for the mixed model fit for an nlme object
2021-07-23Update vdiffr tests for version 1.0Johannes Ranke14-0/+4364

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