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<h1>Function reference</h1>
<h4>version 0.4-2</h4>
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<div class="contents">
<h2 id="section-general-utility-functions" class="hasAnchor"><a href="#section-general-utility-functions" class="anchor"></a>General utility functions</h2>
<p class="section-desc"><p>Functions that are independent of specific fate modelling areas</p></p>
<p><a href="geomean.html">Calculate the geometric mean</a></p>
<ul>
<li><code><a href="geomean.html">geomean</a></code></li>
</ul>
<p><a href="one_box.html">Create a time series of decline data</a></p>
<ul>
<li><code><a href="one_box.html">one_box</a></code></li><li><code><a href="one_box.html">one_box.numeric</a></code></li><li><code><a href="one_box.html">one_box.character</a></code></li><li><code><a href="one_box.html">one_box.mkinfit</a></code></li>
</ul>
<p><a href="plot.one_box.html">Plot time series of decline data</a></p>
<ul>
<li><code><a href="plot.one_box.html">plot.one_box</a></code></li>
</ul>
<p><a href="sawtooth.html">Create decline time series for multiple applications</a></p>
<ul>
<li><code><a href="sawtooth.html">sawtooth</a></code></li>
</ul>
<p><a href="twa.html">Calculate a time weighted average concentration</a></p>
<ul>
<li><code><a href="twa.html">twa</a></code></li><li><code><a href="twa.html">twa.one_box</a></code></li>
</ul>
<p><a href="max_twa.html">The maximum time weighted average concentration for a moving window</a></p>
<ul>
<li><code><a href="max_twa.html">max_twa</a></code></li>
</ul>
<h2 id="section-predicted-environmental-concentrations-in-soil" class="hasAnchor"><a href="#section-predicted-environmental-concentrations-in-soil" class="anchor"></a>Predicted environmental concentrations in soil</h2>
<p class="section-desc"></p>
<p><a href="PEC_soil.html">Calculate predicted environmental concentrations in soil</a></p>
<ul>
<li><code><a href="PEC_soil.html">PEC_soil</a></code></li>
</ul>
<p><a href="soil_scenario_data_EFSA_2015.html">Properties of the predefined scenarios from the EFSA guidance from 2015</a></p>
<ul>
<li><code><a href="soil_scenario_data_EFSA_2015.html">soil_scenario_data_EFSA_2015</a></code></li>
</ul>
<h2 id="section-predicted-environmental-concentrations-in-groundwater" class="hasAnchor"><a href="#section-predicted-environmental-concentrations-in-groundwater" class="anchor"></a>Predicted environmental concentrations in groundwater</h2>
<p class="section-desc"></p>
<p><a href="PELMO_runs.html">Set up runs for FOCUS PELMO</a></p>
<ul>
<li><code><a href="PELMO_runs.html">PELMO_runs</a></code></li><li><code><a href="PELMO_runs.html">run_PELMO</a></code></li><li><code><a href="PELMO_runs.html">evaluate_PELMO</a></code></li>
</ul>
<h2 id="section-predicted-environmental-concentrations-in-surface-water" class="hasAnchor"><a href="#section-predicted-environmental-concentrations-in-surface-water" class="anchor"></a>Predicted environmental concentrations in surface water</h2>
<p class="section-desc"></p>
<p><a href="PEC_sw_drift.html">Calculate predicted environmental concentrations in surface water due to drift</a></p>
<ul>
<li><code><a href="PEC_sw_drift.html">PEC_sw_drift</a></code></li>
</ul>
<p><a href="drift_data_JKI.html">Deposition from spray drift expressed as percent of the applied dose as
</a></p>
<ul>
<li><code><a href="drift_data_JKI.html">drift_data_JKI</a></code></li>
</ul>
<p><a href="PEC_sw_drainage_UK.html">Calculate initial predicted environmental concentrations in surface water due to drainage using the UK method</a></p>
<ul>
<li><code><a href="PEC_sw_drainage_UK.html">PEC_sw_drainage_UK</a></code></li>
</ul>
<p><a href="TOXSWA_cwa.html">R6 class for holding TOXSWA cwa concentration data and associated statistics</a></p>
<ul>
<li><code><a href="TOXSWA_cwa.html">TOXSWA_cwa</a></code></li>
</ul>
<p><a href="read.TOXSWA_cwa.html">Read TOXSWA surface water concentrations</a></p>
<ul>
<li><code><a href="read.TOXSWA_cwa.html">read.TOXSWA_cwa</a></code></li>
</ul>
<p><a href="plot.TOXSWA_cwa.html">Plot TOXSWA surface water concentrations</a></p>
<ul>
<li><code><a href="plot.TOXSWA_cwa.html">plot.TOXSWA_cwa</a></code></li>
</ul>
<h2 id="section-classifications-and-indicators" class="hasAnchor"><a href="#section-classifications-and-indicators" class="anchor"></a>Classifications and indicators</h2>
<p class="section-desc"><p>Evaluating environmental fate properties</p></p>
<p><a href="SSLRC_mobility_classification.html">Determine the SSLRC mobility classification for a chemical substance from its Koc</a></p>
<ul>
<li><code><a href="SSLRC_mobility_classification.html">SSLRC_mobility_classification</a></code></li>
</ul>
<p><a href="GUS.html">Groundwater ubiquity score based on Gustafson (1989)</a></p>
<ul>
<li><code><a href="GUS.html">GUS</a></code></li><li><code><a href="GUS.html">GUS.numeric</a></code></li><li><code><a href="GUS.html">GUS.chent</a></code></li><li><code><a href="GUS.html">print.GUS_result</a></code></li>
</ul>
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<h2>Contents</h2>
<ul class="nav nav-pills nav-stacked">
<li><a href="#section-general-utility-functions">General utility functions</a></li>
<li><a href="#section-predicted-environmental-concentrations-in-soil">Predicted environmental concentrations in soil</a></li>
<li><a href="#section-predicted-environmental-concentrations-in-groundwater">Predicted environmental concentrations in groundwater</a></li>
<li><a href="#section-predicted-environmental-concentrations-in-surface-water">Predicted environmental concentrations in surface water</a></li>
<li><a href="#section-classifications-and-indicators">Classifications and indicators</a></li>
</ul>
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