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+#!/bin/bash
+
+# Author: Johannes Ranke <jranke@uni-bremen.de>
+
+# Script to automate backporting for CRAN
+# Make sure the R version in ./backport is correctly set and the pbuilder chroot is updated
+
+usage()
+{
+echo "Usage: ./backport_others [options] squeeze|wheezy|jessie"
+echo "Options:"
+echo " -n Skip apt-get update/upgrade and pbuilder update"
+}
+
+update=true
+while getopts ":n" flag; do
+ case $flag in
+ n)
+ update=false
+ ;;
+ \?)
+ echo "Invalid option: -$OPTARG" >&2
+ ;;
+ esac
+ shift $((OPTIND-1))
+done
+
+# Check for number of arguments
+if [ $# -lt 1 ]; then usage; exit 1; fi
+DIST=$1
+
+# Update pbuilder chroot
+if [ "$update" = true ]
+then
+ sudo -E pbuilder update
+fi
+
+# Validate distribution argument
+if [ $DIST != "squeeze" ] && [ $DIST != "wheezy" ] && [ $DIST != "jessie" ]; then usage; exit 1; fi
+export DIST
+
+# When doing a new repository, lattice, r-cran-mass and survival have to be
+# built first, then nlme and rmatrix, then the rest
+
+# Packages to backport to squeeze/wheezy/jessie (without rpy2):
+for i in lattice nlme rmatrix mgcv boot cluster codetools foreign kernsmooth r-cran-class r-cran-coda r-cran-spatial r-cran-nnet r-cran-mass rodbc rpart survival r-cran-littler rpy rkward r-cran-rjags; do
+
+ ./backport -n $i $DIST
+
+done

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