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Fitting kinetic models to chemical degradation data (also on github)
Johannes Ranke
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2023-02-13
Merge branch 'main' into custom_lsoda_call
Johannes Ranke
11
-37
/
+164
2023-01-09
Prebuilt PDF vignettes, summary_listing
Johannes Ranke
4
-23
/
+29
2022-12-19
Rename template folder, create format
Johannes Ranke
1
-0
/
+29
2022-12-15
List random effects correlations in output if any
Johannes Ranke
1
-1
/
+12
2022-12-07
Check slopes in saemix covariate models
Johannes Ranke
1
-1
/
+12
2022-12-06
Some parplot improvements
Johannes Ranke
1
-1
/
+6
2022-12-01
Possibility to manually specify no_random_effects in mhmkin
Johannes Ranke
1
-6
/
+44
2022-11-25
mhmkin: Easy specification of ill-defined parms
Johannes Ranke
1
-9
/
+7
2022-11-18
Make mixed model test data permanent to ensure reproducibility
Johannes Ranke
1
-0
/
+24
2022-11-18
Pass error.init to saemix_model, show in parplot
Johannes Ranke
2
-1
/
+6
2022-11-16
Update docs
Johannes Ranke
1
-1
/
+1
2022-11-16
We get about 25% performance gain
Johannes Ranke
3
-16
/
+19
2022-11-14
Automatic starting parameters for saem.mmkin
Johannes Ranke
1
-1
/
+15
2022-11-08
Show DFOP g equivalent of SFORB in summary, test
Johannes Ranke
1
-2
/
+3
2022-11-08
Simplify SFORB also in the endpoint function
Johannes Ranke
1
-9
/
+8
2022-11-08
Simplify SFORB analytical solution, whitespace
Johannes Ranke
2
-4
/
+4
2022-11-04
Attempt at automatic setting of random effects
Johannes Ranke
1
-3
/
+15
2022-11-04
Make it easy to override maxsteps for lsoda
Johannes Ranke
1
-15
/
+18
2022-11-04
Never fail with errors in saem.mmkin
Johannes Ranke
1
-4
/
+0
2022-11-03
Update docs
Johannes Ranke
1
-1
/
+2
2022-11-01
Add tex_listing()
Johannes Ranke
1
-0
/
+20
2022-11-01
Add read_spreadsheet
Johannes Ranke
1
-0
/
+55
2022-11-01
Fix plotting saem fits with covariates
Johannes Ranke
2
-0
/
+11
2022-11-01
Fix illparms tests
Johannes Ranke
1
-1
/
+1
2022-11-01
Improved printing for illparms()
Johannes Ranke
1
-2
/
+5
2022-10-31
Fix R CMD check
Johannes Ranke
3
-3
/
+14
2022-10-29
Update multistart docs
Johannes Ranke
1
-2
/
+2
2022-10-28
Rename parhist to parplot and make it generic
Johannes Ranke
3
-11
/
+14
2022-10-28
Export status method for mhmkin, move to status.R
Johannes Ranke
1
-0
/
+6
2022-10-28
Rename 'convergence' method to 'status'
Johannes Ranke
3
-40
/
+39
2022-10-26
Update multistart example code and vignette
Johannes Ranke
1
-9
/
+2
2022-10-26
Remove kernel density estimate from llhist
Johannes Ranke
1
-3
/
+2
2022-10-25
Complete documentation and fix a bug
Johannes Ranke
3
-4
/
+19
2022-10-21
Add a simple anova method for model comparison
Johannes Ranke
4
-1
/
+57
2022-10-14
Select best fit from multistart, use in parhist
Johannes Ranke
2
-4
/
+32
2022-10-05
Simplify the removal of random effects
Johannes Ranke
1
-0
/
+12
2022-09-29
Add set_nd_nq previously in pfm
Johannes Ranke
1
-0
/
+103
2022-09-28
Fix handling of multistart fits with failures
Johannes Ranke
2
-4
/
+7
2022-09-19
Make the multistart method work on Windows
Johannes Ranke
1
-7
/
+19
2022-09-19
Improve parhist and llhist
Johannes Ranke
1
-7
/
+3
2022-09-16
Improve multistart documentation, bugfix
Johannes Ranke
3
-14
/
+94
2022-09-16
Improve docs and update pkgdown
Johannes Ranke
2
-15
/
+16
2022-09-16
Diagnostic plots for multistart method
Johannes Ranke
3
-4
/
+25
2022-09-13
More work on multistart
Johannes Ranke
3
-2
/
+14
2022-08-14
Basic multistart method for saem.mmkin objects
Johannes Ranke
3
-9
/
+55
2022-08-10
Update docs
Johannes Ranke
1
-1
/
+6
2022-08-10
Batch processing for hierarchical fits
Johannes Ranke
3
-7
/
+112
2022-07-26
Import parallel instead of depending on it
Johannes Ranke
1
-2
/
+2
2022-07-21
Summary method for mmkin objects
Johannes Ranke
4
-1
/
+122
2022-05-18
Remove outdated comment in FOCUS L vignette, update docs
Johannes Ranke
2
-12
/
+12
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